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Audiograms from 16,000 Vanderbilt patients yield better hearing-loss risk scores than billing codes

Vanderbilt researchers built hearing-loss risk scores from 16,000 people's audiograms that predicted better than scores built on billing codes. The released summary does not say how much better, and any biobank deciding whether to store hearing-test numbers will need that figure.

The Scientist · Science desk

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What happened

  • The team cross-referenced complete audiometric records, with hearing thresholds across test frequencies, against genomic data in BioVU, Vanderbilt Health's biobank linked to health records.
  • Polygenic risk scores built from those quantitative measurements were then checked in an independent validation cohort.
  • Two patients with the same diagnostic code can differ widely in degree, pattern and frequency of hearing loss, and the team says that variation blunts code-based genetic associations.
  • The study, by audiologists, otolaryngologists and bioinformaticians at Vanderbilt University Medical Center, appears in JAMA Otolaryngology-Head & Neck Surgery.

Why it matters

  • constraint Biobanks that hold only diagnosis codes, the usual case according to co-first author Andie DeFreese, cannot build audiogram-based scores; the gain is open only to collections that kept the test numbers.
  • capability Frequency-specific risk profiles would let clinicians match emerging gene therapies to the pattern of loss a patient is predicted to develop, the use the Vanderbilt team proposes.
  • precedent Swapping a diagnosis code for the clinical test result behind it is a design other biobank studies of test-measured conditions can copy if the hearing result holds up.

"Diagnostic codes are very common because that's the data that's available in large genetic biobanks that facilitate this research," said Andie DeFreese, a clinical audiologist at Vanderbilt and co-first author of the study [8][12]. "Using them leads to a kind of gray area in which we're not able to accurately define who has hearing loss and who doesn't." [9]

The gray area comes from how genetic biobank studies are usually run. ICD codes sort people into cases and controls, a method the release calls expedient for processing millions of patient charts [10]. An audiogram swaps that yes-or-no label for a measured threshold at each tested frequency [5]. The team calls the substitution precision phenotyping [2]. Scoring the results on an independent validation cohort rules out the simplest way to inflate a polygenic score, which is to grade it on the same people it was fitted to [1].

According to the release, the audiogram-based scores showed "significantly superior predictive power" [11]. A modest gain and a large one would justify very different investments by a biobank. The summary does not report the accuracy metric, the size of the gap, or how many people were in the validation cohort.

The design also has a tension over the denominator. Audiograms were available for 16,000 people [4], while codes exist across millions of charts [10]. In a genome-wide study, both cleaner labels and more people add statistical power. I'd want to know whether the code-based score in the comparison was built on the same 16,000 people or on a larger code-defined sample. The first version asks whether a better label helps at equal size. The second asks whether depth beats breadth, the choice a biobank planner actually faces.

"Before symptoms" is in the release's headline, and the team's stated aim is to identify at-risk patients before onset [13]. The summary does not describe any test in people whose hearing is still normal. Ranking people better in a validation cohort is a research result. A screening programme also needs scores calibrated to the general population and a treatment to offer the people it flags.

For now the advantage sits with biobanks built the way BioVU is, with de-identified genetic data linked to health records that include full audiograms [5].

What to watch

  • A replication in a second biobank with linked audiometry, outside Vanderbilt's own patient population.
  • Whether other biobanks start extracting audiometric thresholds from their health records for genetic work.
  • A prospective study that scores people with normal audiograms and follows them for later hearing loss.

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  1. [1]

    The researchers constructed polygenic risk scores from quantitative audiometric measurements and tested them in an independent validation cohort.

    ReportedSupportedSource: Vanderbilt University Medical Center release via Neuroscience News2 sources— create a free account to open themView cited source
  2. [2]

    Replacing generic diagnostic codes with granular clinical test results is a concept known as precision phenotyping.

    ReportedSupportedSource: Vanderbilt University Medical Center release via Neuroscience News2 sources— create a free account to open themView cited source
  3. [3]

    Polygenic risk scores derived from quantitative audiometric data predicted sensorineural hearing loss more accurately than models built using standard diagnostic billing codes.

    ReportedSupportedSource: Vanderbilt University Medical Center release via Neuroscience NewsView cited source

Sources

1 independent publisher whose own reporting we read for this story.

  1. neurosciencenews.com

    1 article · October 8, 2026

    Can We Predict Hearing Loss Long Before Symptoms Ever Start?

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  • Vanderbilt University Medical CenterFollow
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